So, I've been slacking on posting updates...
**SPOILER ALERT**
The game totally plays now! On top of having 5V issues on the power driver board, it turns out the MPU was grumpy, too. I was getting fuse errors, even though the fuses were fine. Also, leaking batteries wreaked a little more havoc than I was expecting. For example, even when I put new batteries in it, it wouldn't hold the settings. So I bought a new Rottendog MPU. It seemed worth the $200+ for a little piece of mind.
It would seem the 5V power issues were coming from bad traces between bridge rectifiers and capacitors. So I did many of the jumpers that the PinWiki had listed:
As you see, it looks like a previous tech soldered in the bridge rectifiers with a butane torch. Menace told me there's a spray you can buy to remove all that excess flux residue. I put the boards back in, and the game fired right up!
I'd like to clean that mess up, but for now I'm just happy it plays so well.
Thanks to Menace and Grauwulf for the tech support!
There's still some board work to do, (like re-pinning the melted GI connectors on the Power Driver board) and some repairs to do, so I'll try to post a little more frequently.